CDS

Accession Number TCMCG015C00816
gbkey CDS
Protein Id XP_027123341.1
Location join(34703272..34703340,34703497..34703619,34704878..34705035,34705585..34705629,34706641..34706719,34706819..34706892,34707353..34707459,34709931..34710113,34711707..34711910,34712010..34712223,34712315..34712389,34712523..34712866,34713314..34713500,34713913..34714165,34714241..34714577,34714839..34715019,34715130..34715270,34715370..34715631,34715727..34716182,34716578..34717041,34717710..34717834,34717942..34718123,34718201..34718560,34718670..34718795,34720181..34720246,34720336..34722131,34722234..34722543)
Gene LOC113740051
GeneID 113740051
Organism Coffea arabica

Protein

Length 2306aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027267540.1
Definition small subunit processome component 20 homolog [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGCCCGCGGACGCTCGAGCCGTAAAGTCTCTAAACACAGGCGAGGGAAGCAAGAAATTTGTTTACAAGTCCAATGTTCAACAAATTGCAGAGATTGATATTAATGTATACCGAAGTTTGGACCCTGTTAAATCTGAGCCTTCTAAAGGGTCCACGTTTTTTCGCGATTGCCTAGTTGAATGGAGAGAATTAAATACTGCTGAGGATTTTATTTCATTTTATCAAGAAATGTTCCCCTTGGTACAAACCCTACCACAAATTATATTGCAAAAGGAATTGATCGTTTCAAAACTGCTTTCTAGATTACAAATAAAAAGCAGGCTATCACTGGAGCCAATACTCAGGTTGGTAGCCACATTATCAAGGGATCTTCTGGAGGATTTTTTGCCCTTTCTCCAGAGGATTGTGAATGCTATAGTATTTCTTCTGAAAAATGGTGGTGATAAGGATCCAGACATAATTAAGCAGATTTTTACGTCATGGTCATACATTATGATGTTCCTGCAGAAATATCTGATAAAGGATGTCATTCATGTGCTAAAAGTAACAGTGAAACTGAGATACTATCCACATGGTAGCATACAAAAATTTGTGGCGGAGTCCGTCTCTTTCTTACTCAGGAATGCACCTGTTGAGCAGCTTATAAAAGGTGTTAGGAAAATCATGATTGAGGTCGTAAAGAATCCATTGGCTAAGAGGAAAAGTGGTGCTACTGAATTATTGTGGCATGTGATAAGAGGTTCGTCATCAACATTGCATTCAAGGGCCCCACAAGTGTTGCAGCTTCTATTGGACAAGTCCTTATTCAGCATCGGTGATCAACTCTTGGAAGATCCAGACTGCCTTCTTGAAATTGTCATATCGACTTTCCAGAGATTGAGCAATGAGGCAGGGCCTGTGGAATTAAATTTGATTTGGGATTGCTTATATGGTGAAATAATTGAATCAGTAACCAATGGTCACTCAATGCACGTCAGTCGACTTCTCTCCGTACTCGTATTAATTGTGGAGAATGGTTTTATGAAGAAAATTTCCGATTACCAGCCTATGTTTAAGCTAGTCAGGTTGCTAGTGCAGACATATGTTCCTCCTGTTACTGAGGAGGGTGGAAAACAAGCTACAGACATCGTCATTAAAATCTTGCAGCTGTCATTGTTCATTGTTGATGGCCTCCACAAAGCTAATGACCTGTCAGCTCTCTCTGATTTTTCATGTCAGTTGGTTCCCATATTTAGTTTGAAGAATCCTGGTTTGCTGACTTTTCTTAAAGACCTTGTGTCAAGGGACTCCAATGTTCTCAAAATATTCAGGATTAATATTATAAGTGCATTGAATGATTTAACCAACATTTCAGAAGAAGAAACTGTATATTTGCTGCTAAGATTGTGTGAGAATCTTAAAATGCCAAGCTTCTCATTCTTAGATGGTATCTCAAAAGACAAGCTTTCAAGAATTTATGATTTGGTTCAGCAAAGCATCAGTTACTGGATAGGAATGATCAGTAATTCGTTACATGGAGATTTATCTTCTCTTCAGTTGGAACAGAGCAGGCTGGCTCTCCTGTGGGGGACTGTCAAATGCTATCCCTATTTGTTCAATGGCCAGGAGAATCTGACATTACTATTGGACCTTTTAAATGCTATCGATGAGCTTCTGATGACTGAATCTGGATTGGCAGATCTTACTTGGCAGAGCCTAATTGCTGCTGCTTTGGGTTCTTATAAAGAAATGCTCTCCAGCAGTGGAACTGGATGTGAAGAGTCTGCAATAAGCAAATTCCTGTATCTGGCAAAAAAATACCACTCATCTTCTCAAATATTAGCCCCCATAGCTGATATTTTGGATTCACATTTTGGATCTGTGATTAAAGGGTGCACCAGCTTTAGAAGATATCACCCAGATCTTGCAGCCAGGAATGTAATCGATGCATTAGACATATTGGCTGAAAATCTGTGCAACTGTGATCAAATGCTTCGACGGTCGACCCTCAGAATTTTGTGCCACTATGAACCTTTGAAGTTTGAATCTTCTTTTAACACACAGCCAGATGAGAAAACTGCTGGAAATGATATTATGCAGACCTTTAATGTTGATGTTCGTGGTGATAATGTTCTAGAGCTTCTCCTTTCAGTTGAAACTACTGAGCCTTCATCTACTGATAGAAAAATTGAGCTTCTATTATCCCGGATCCAGGTGAATGTATCTGCCCGGAGGATAGATGAGAATTATGTGCCAGCCCTGTTATATGGCTTGATTGGCATCTTCCACATTCGGCTTAGCAACTTATGGATTCCAGCTAAGGAGTGTCTTGCTGTTCTAATAAGCCAAAACTTTGGAATTGTATGGGAACCGTACATGAAATATCTGGACCACTGTCAGTCATTGTTTCTGATATCTTGTGATCAATCTAGCAGAAGTGGTACCAAATCACTTAATCAGTCAAGTGATTTGGTTGGATACTTCAATTTGTCTATCAATCCCCCATGTGGTAGTACGCCGTGCGCTACACTTTTCTCGTTAATGATTCAATCGCTGCAAAAAGTTCCATTTCTAGCTGAAACTCGGTCACGACAATTAATGCCTTTTTTCTTGAAGTTTCTGGGATATAGTGTTGATGATCTTTTGAGTGTTGAGTTATACAATGTACATTGTTGCAAGGGCAGAGAGTGGAAGGAGGCCCTTAAAGAGTTGTTAAACTTGTTTAGGTTGCTGCGGAATCCAAAGTCTTTTTATCAGAGCCAATTCATCAAGGATGTTTTTCTATATAGGCTTCTGGATGAAACAGATACTGAGTTACAGTTAAAGGTTCTTGATTGCCTTTTAAACTGGAAGGATGAATTCTTACTTCCTTACAGTCAGCATCTGAAAGATCTGATCAATGCAAAGAATTTGAGAGAGGAGCTAACGACGTGGAGCTTGTCCAGGGAATCTAATGAAATCGATGAACATCATAGGGATTTCATTGTGCCTATTGTCATTCGGATATTGGTACCAAAAGTCAAGAAACTAAAAACTCTTGCTTCTCGAAAGCATGCAAGTGTACATCAGAGAAGGGCAATACTTGGATTCTTAGCTGAGCTTGACATTCAAGAGCTTCCTCTATTTTTTTTCTTGTTGATAAAGCCTCTTCAAGGTACTTCAGTAACAGCTGATGTGAGCAGACAGTGTCTTTTGAGTTCATCAGAGAGCATTAAGGATGAATTTGATTCAATTAGCATCTTGAAGCAATTTACTGTGGATGGCTTAAAGGGGCTTTCTTGGAAGAAGAAATTTGGTTTCTTGCATGTCATTGAAGAGATTTTAGCTGTTTTTGATGAATACCATATAAATCCTTTTCTTAATTTACTAATGGGCTGTGTTGTACGGGTACTCGAAAGCTGCACGGCTGCTTTAGAGAGCTCAAAATGCAAAGAACCGTCTCTAACAGATTCTGGCTTCAATGTGGCAGCAGCTTATGATATTGTTGACAGGGAAATAGAAATTGTGACTAGCACAGCTGTGAAGCAATTCAAGGAATTGAGATCTTTATGCCTGAAGATTGTTTCTTCTGCTCTTGCTAAGTATGAGAATCATGATTTTCATTCCGAGTTTTGGGACCTTTTCTTTACAGCAGCGAGTCCTTTAATAGGCAGTTTTAAGCAAGAAGGTGCGAGTAGTGAGAAGCCAAGTTCACTATTCTCTTGCTTCCTTGCTATCAGTAGAAGCATCAAGTTTGTGCCACTGTTGGGTAGAAAGAAGAATCTTGTTCCCGATATATTTTCGATGTTTACCATCACGACCGCATCTGATGCGATCATATCTTGTGTTTTTAAGTTCGTTGAAAACTTACTAAATCTTGACAGTCAGCTGGGGACTGAGGATGGTTCTGTCAAAAGAGTGTTGCTTCCTCACCTCAACGTACTTGTAGATAGTCTACACTGTCTGTTCACTATTGATAGTGGAACAAAGAGGCATCCTGCAGATAACGAGCTCTTTGTGTTCAAATTATTGTCGAAGTACATAACGGAGCCTTTAACAGCCAAGAAATTTGTTGATATCTTGCTTCCACTTCTCGCAAAGAGACTCCGAAACTCTGATTCTTGTGTTGTCATTTTACAGATACTTCAATCTGTGGTTGAAGTTGTGGGAAGTGAAAATAATTCTAAAATTTTGAGTTCAGTATCTCCCTTGCTTACATTTGCTGGGCTGGATGTCAGGAAGTCCATTTGTGATGTTCTTAATGCTCTTGCTAAAGATGATTCTTCTGTCTTTGTCGTGGCAAAGCTTCTGAATGAAATGAATGCAACCTCCGCAATGGATATTGGGTCCCTTGATTATGACACTATAATTGGTGCATATGAAAAGATCAACAGGGAGTTTTTCCACACGGTGGGGAAAGAGCATGCACTGATCATTTTGTCTCAGTCTGCATATGACATGTCATCTGAAGAGTTGATCTTCCGGCAGAGTGCATATAGATTGTTGCTCTGCTTTGTTGAATTTGCCTCTGAAATTGTTGAGTCAAAGGATAAATCTGATCAAGGGTGCTGGACTGAAGCTCTTATTCAACATATTGTAACTAGCTTTCTTTTGAAGCATATGGGAAATGCAATGAATAGGGAAACTTCTGTTCAAAAGCTTTGGATTGATTTACTGCGAGAAATGGTGTTGAAGCTTCCAAAGGTTGCAAACCTCGAATCTTATGGAACTTTGTACAGTCAAGATCCAGAGCAGGATTTCTTCAATAATGTTATTCATTTACAGAAACACAGGCGAGCCAGGGCACTTTCTCGATTTTCGCAGTTCATTAGTACAGGAAATCATTCTGAGGTTGTTAGCACCAAAGTGTTTATCCCACTCTTTTTCAATTTGTTATTTGGTGTACAAGAGGGGAAGGGTGAAAATGTCAGAAGTGCATGTATGGAGGCTATTGCATCAATTGCTGGTTGCATGACCTGGAAACAGTACTATGAACTATTAATGAACTGCTTTCGAGAAATGACTAAACGAGAGAAGCAGAAGGTCATATTGCGATTAATATGCTGTATTCTGGACCACTTTCACTTCTCTGAAACTCCTGCAGAGGGTGTTCTTCGTGCCGAAGCTTTTGAGAGAATATCTTCTAGAGAATTGAGGAGATGCACACAGCCAGCTAAATTTTCTGATATGCAGACGTGTATTCAGAAGACAATGCTTCCCAAGATACAAGAATTGCTATCTGATTCTGATAATGTGAATGTGAACATCAGTCTAGTTGCCCTTAAGTTACTCAAATTACTTCCTGGTGAAATTATGAATTTGCAACTTCCAAATATTGTTCATCGCATCTCCAACTTCCTTAAGCATCGCTTGGAGAGTGTTCGAGATGAGGCTAGATTGGCTTTGGCTGCTTGTTTAAAGGAGCTAGGGTTGGAGCACCTACAATTCATGGTCAAAGTCTTGAGGGGCACCCTCAAAAGGGGATCTGAATTGCACACACTTGGTTATACCCTGAATTTTATATTGTCAAAGTTTCTTATCAATCCCATTAGGGGGAAGTTGGATTCTTGTCTTGAAGATCTTTTTTCGGTGATAGAGATTGATATACTTGGAGATGTTTCTGAGCAGAAAGAGGTGGACAAAATTGCTTCAAAAATGAAGGAGACTCGGAAGCAGAAGTCATTTGAAACCCTCAAATTGGTTGCGCAAAACATCACATTTAGAACCCATGCTGTGAAGCTCCTTTCTCTTGTTACAGCTCATCTACAGAAGCAGCTATCTCCAAAACAGAAATCGAAATTGGAGAATATGTTGAATCACATTGCTGATGGAATTCAGTCTAATGCGTCTGTAGATCAAACTGAACTGTTTATATTTGTATATCGCCTCATTAAGGATGGCATAGATGATGTAAATCATGAACGCAAACACGTATATATGTCAGAGGCAGGGAAAGGAGACTGTGATTTGGTGGATAGTCAAATGATTAATTCAGACAGGTTAATAAATCTTGAGCCCAGATATTCTCACTTAATTACTGGTTTTGCACTTGGATTATTGCAAAATCACATTAAGGGCATGAAACTGAACAGAAAAGACGAGGAGCAGCTGTCACTGTTAGACCCTTTGGTTCACTTGTTGGGTGATTGCTTGAGTTCAAAATACGAGAACATTGTGACGACAGCACTCAGATGCCTTTCTCCTCTGGTACGATTACCTCTGCCCTCCCTTGAATCCCAGTCTGACAAGATAAAGAATTCTTTATTGTTTATTGCTCAACATTCAGCAAATGCTGGCAGTCCTTTGGTGGAGTCTTGTTTGAGGCTGTTGACTGTGCTTCTTCATAGCACTGGTGTTACACTTTCAGCAGATCAGTTGCACATGTTAATTCAGTTTCCTTTATTTGTTGACATAGAAAGAAATCCATCTATTGTGTCCCTTTCCCTTCTAAAATCAATAGTGAATAGGAAGCTGGTAGTTCCTGAGATATATGATGTCGTCAAGAGGGTTGCAGAGCTGATGATAACCAGCCAAGTGGAATCAATACGTAAGAAATGTAGTCAAATTTTACTCCAATTTTTGCTTGACTATCATCTGTCAGAGAAACGCTTGCAGCAGCATCTTGATTTCTTTCTTGCGAATCTCAGATATGAACATTCTTCTGGAAGAGAAGCTGTACTTGAAATGCTGCATGCCATTATAATGAAGTTTCCAGCAAGTATTCTTGATGAGCAGTCACAGACGATATTTGTGCATCTGGTGGTTTGTTTGGCTAATGACCATGACAACAAAGTCCGTTCCATGACTGGTGCTTCTATAAAGCTGCTTATTGGGCGTGTCAGTTCTCGCTCAGTTAAATCCATTATTGAGTATAGTGTCTCCTGGTATGTGGGTGAAAAACAGCATCTATGGAGTACTGCAGCACAGGGAAAGTTGTGGACTCTGTTCTATAGGTGA
Protein:  
MATPADARAVKSLNTGEGSKKFVYKSNVQQIAEIDINVYRSLDPVKSEPSKGSTFFRDCLVEWRELNTAEDFISFYQEMFPLVQTLPQIILQKELIVSKLLSRLQIKSRLSLEPILRLVATLSRDLLEDFLPFLQRIVNAIVFLLKNGGDKDPDIIKQIFTSWSYIMMFLQKYLIKDVIHVLKVTVKLRYYPHGSIQKFVAESVSFLLRNAPVEQLIKGVRKIMIEVVKNPLAKRKSGATELLWHVIRGSSSTLHSRAPQVLQLLLDKSLFSIGDQLLEDPDCLLEIVISTFQRLSNEAGPVELNLIWDCLYGEIIESVTNGHSMHVSRLLSVLVLIVENGFMKKISDYQPMFKLVRLLVQTYVPPVTEEGGKQATDIVIKILQLSLFIVDGLHKANDLSALSDFSCQLVPIFSLKNPGLLTFLKDLVSRDSNVLKIFRINIISALNDLTNISEEETVYLLLRLCENLKMPSFSFLDGISKDKLSRIYDLVQQSISYWIGMISNSLHGDLSSLQLEQSRLALLWGTVKCYPYLFNGQENLTLLLDLLNAIDELLMTESGLADLTWQSLIAAALGSYKEMLSSSGTGCEESAISKFLYLAKKYHSSSQILAPIADILDSHFGSVIKGCTSFRRYHPDLAARNVIDALDILAENLCNCDQMLRRSTLRILCHYEPLKFESSFNTQPDEKTAGNDIMQTFNVDVRGDNVLELLLSVETTEPSSTDRKIELLLSRIQVNVSARRIDENYVPALLYGLIGIFHIRLSNLWIPAKECLAVLISQNFGIVWEPYMKYLDHCQSLFLISCDQSSRSGTKSLNQSSDLVGYFNLSINPPCGSTPCATLFSLMIQSLQKVPFLAETRSRQLMPFFLKFLGYSVDDLLSVELYNVHCCKGREWKEALKELLNLFRLLRNPKSFYQSQFIKDVFLYRLLDETDTELQLKVLDCLLNWKDEFLLPYSQHLKDLINAKNLREELTTWSLSRESNEIDEHHRDFIVPIVIRILVPKVKKLKTLASRKHASVHQRRAILGFLAELDIQELPLFFFLLIKPLQGTSVTADVSRQCLLSSSESIKDEFDSISILKQFTVDGLKGLSWKKKFGFLHVIEEILAVFDEYHINPFLNLLMGCVVRVLESCTAALESSKCKEPSLTDSGFNVAAAYDIVDREIEIVTSTAVKQFKELRSLCLKIVSSALAKYENHDFHSEFWDLFFTAASPLIGSFKQEGASSEKPSSLFSCFLAISRSIKFVPLLGRKKNLVPDIFSMFTITTASDAIISCVFKFVENLLNLDSQLGTEDGSVKRVLLPHLNVLVDSLHCLFTIDSGTKRHPADNELFVFKLLSKYITEPLTAKKFVDILLPLLAKRLRNSDSCVVILQILQSVVEVVGSENNSKILSSVSPLLTFAGLDVRKSICDVLNALAKDDSSVFVVAKLLNEMNATSAMDIGSLDYDTIIGAYEKINREFFHTVGKEHALIILSQSAYDMSSEELIFRQSAYRLLLCFVEFASEIVESKDKSDQGCWTEALIQHIVTSFLLKHMGNAMNRETSVQKLWIDLLREMVLKLPKVANLESYGTLYSQDPEQDFFNNVIHLQKHRRARALSRFSQFISTGNHSEVVSTKVFIPLFFNLLFGVQEGKGENVRSACMEAIASIAGCMTWKQYYELLMNCFREMTKREKQKVILRLICCILDHFHFSETPAEGVLRAEAFERISSRELRRCTQPAKFSDMQTCIQKTMLPKIQELLSDSDNVNVNISLVALKLLKLLPGEIMNLQLPNIVHRISNFLKHRLESVRDEARLALAACLKELGLEHLQFMVKVLRGTLKRGSELHTLGYTLNFILSKFLINPIRGKLDSCLEDLFSVIEIDILGDVSEQKEVDKIASKMKETRKQKSFETLKLVAQNITFRTHAVKLLSLVTAHLQKQLSPKQKSKLENMLNHIADGIQSNASVDQTELFIFVYRLIKDGIDDVNHERKHVYMSEAGKGDCDLVDSQMINSDRLINLEPRYSHLITGFALGLLQNHIKGMKLNRKDEEQLSLLDPLVHLLGDCLSSKYENIVTTALRCLSPLVRLPLPSLESQSDKIKNSLLFIAQHSANAGSPLVESCLRLLTVLLHSTGVTLSADQLHMLIQFPLFVDIERNPSIVSLSLLKSIVNRKLVVPEIYDVVKRVAELMITSQVESIRKKCSQILLQFLLDYHLSEKRLQQHLDFFLANLRYEHSSGREAVLEMLHAIIMKFPASILDEQSQTIFVHLVVCLANDHDNKVRSMTGASIKLLIGRVSSRSVKSIIEYSVSWYVGEKQHLWSTAAQGKLWTLFYR